univi.plotting.compare_raw_vs_pred_umap_features#
- univi.plotting.compare_raw_vs_pred_umap_features(adata, *, obsm_key='X_univi', features, pred_layer, raw_layer=None, pred_is_logits=False, n_neighbors=30, random_state=0, force_recompute=False, panel_size=(4.0, 3.6), wspace=0.15, hspace=0.15, savepath=None, show=True, close=None, return_fig=False, bbox_inches='tight', pad_inches=0.02, **scanpy_kwargs)[source]#
- 2-row grid:
row 1: raw row 2: predicted
pred_is_logits=True will plot sigmoid(pred_layer) by creating a temporary layer.